Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-940 in COID Lung Bhattacharjee Cluster 3 Table contains all genes in the COID Lung Bhattacharjee cluster number 3. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-940 8036 SHOC2 soc-2 suppressor of clear homolog (C. elegans) [Source:HGNC Symbol;Acc:15454] zzz999 9463 PICK1 protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:9394] P T 4633 MYL2 myosin, light chain 2, regulatory, cardiac, slow [Source:HGNC Symbol;Acc:7583] zzz999 23245 ASTN2 astrotactin 2 [Source:HGNC Symbol;Acc:17021] P T 9107 MTMR6 myotubularin related protein 6 [Source:HGNC Symbol;Acc:7453] zzz999 9445 ITM2B integral membrane protein 2B [Source:HGNC Symbol;Acc:6174] zzz999 7712 ZNF157 zinc finger protein 157 [Source:HGNC Symbol;Acc:12942] zzz999 1452 CSNK1A1 casein kinase 1, alpha 1 [Source:HGNC Symbol;Acc:2451] zzz999 65117 RSRC2 arginine/serine-rich coiled-coil 2 [Source:HGNC Symbol;Acc:30559] zzz999 6509 SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:HGNC Symbol;Acc:10942] P T 3301 DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 [Source:HGNC Symbol;Acc:5229] zzz999 3761 KCNJ4 potassium inwardly-rectifying channel, subfamily J, member 4 [Source:HGNC Symbol;Acc:6265] zzz999 5566 PRKACA protein kinase, cAMP-dependent, catalytic, alpha [Source:HGNC Symbol;Acc:9380] T 5295 PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:HGNC Symbol;Acc:8979] zzz999 10209 EIF1 eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] zzz999 11137 PWP1 PWP1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17015] zzz999 4524 MTHFR methylenetetrahydrofolate reductase (NAD(P)H) [Source:HGNC Symbol;Acc:7436] T 9400 RECQL5 RecQ protein-like 5 [Source:HGNC Symbol;Acc:9950] zzz999 23095 KIF1B kinesin family member 1B [Source:HGNC Symbol;Acc:16636] T 1413 CRYBA4 crystallin, beta A4 [Source:HGNC Symbol;Acc:2396] zzz999 27429 HTRA2 HtrA serine peptidase 2 [Source:HGNC Symbol;Acc:14348] zzz999 11231 SEC63 SEC63 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21082] zzz999 3326 HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 [Source:HGNC Symbol;Acc:5258] zzz999 6885 MAP3K7 mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:6859] T 23315 SLC9A8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:HGNC Symbol;Acc:20728] T 1805 DPT dermatopontin [Source:HGNC Symbol;Acc:3011] zzz999 27097 TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa [Source:HGNC Symbol;Acc:17304] zzz999 8454 CUL1 cullin 1 [Source:HGNC Symbol;Acc:2551] zzz999 23600 AMACR alpha-methylacyl-CoA racemase [Source:HGNC Symbol;Acc:451] zzz999 6524 SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:HGNC Symbol;Acc:11037] zzz999 8703 B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 [Source:HGNC Symbol;Acc:926] T 11236 RNF139 ring finger protein 139 [Source:HGNC Symbol;Acc:17023] zzz999 93487 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like [Source:HGNC Symbol;Acc:19840] T 5110 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:HGNC Symbol;Acc:8728] zzz999 4606 MYBPC2 myosin binding protein C, fast type [Source:HGNC Symbol;Acc:7550] zzz999 3508 IGHMBP2 immunoglobulin mu binding protein 2 [Source:HGNC Symbol;Acc:5542] zzz999 4103 MAGEA4 melanoma antigen family A, 4 [Source:HGNC Symbol;Acc:6802] zzz999 755 C21orf2 chromosome 21 open reading frame 2 [Source:HGNC Symbol;Acc:1260] zzz999 23064 SETX senataxin [Source:HGNC Symbol;Acc:445] zzz999 10205 MPZL2 myelin protein zero-like 2 [Source:HGNC Symbol;Acc:3496] zzz999 9379 NRXN2 neurexin 2 [Source:HGNC Symbol;Acc:8009] P T 10058 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:HGNC Symbol;Acc:47] zzz999 51512 GTSE1 G-2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:13698] T 5718 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:HGNC Symbol;Acc:9557] zzz999 2887 GRB10 growth factor receptor-bound protein 10 [Source:HGNC Symbol;Acc:4564] T 27240 SIT1 signaling threshold regulating transmembrane adaptor 1 [Source:HGNC Symbol;Acc:17710] zzz999 4487 MSX1 msh homeobox 1 [Source:HGNC Symbol;Acc:7391] zzz999 54535 CCHCR1 coiled-coil alpha-helical rod protein 1 [Source:HGNC Symbol;Acc:13930] zzz999 25820 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) [Source:HGNC Symbol;Acc:689] zzz999 5669 PSG1 pregnancy specific beta-1-glycoprotein 1 [Source:HGNC Symbol;Acc:9514] zzz999 1161 ERCC8 excision repair cross-complementing rodent repair deficiency, complementation group 8 [Source:HGNC Symbol;Acc:3439] T 1389 CREBL2 cAMP responsive element binding protein-like 2 [Source:HGNC Symbol;Acc:2350] zzz999 253943 zzz999 zzz999 zzz999 2145 EZH1 enhancer of zeste homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3526] T 11045 UPK1A uroplakin 1A [Source:HGNC Symbol;Acc:12577] zzz999 115703 ARHGAP33 Rho GTPase activating protein 33 [Source:HGNC Symbol;Acc:23085] zzz999 23158 TBC1D9 TBC1 domain family, member 9 (with GRAM domain) [Source:HGNC Symbol;Acc:21710] zzz999 1947 EFNB1 ephrin-B1 [Source:HGNC Symbol;Acc:3226] P T 8605 PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) [Source:HGNC Symbol;Acc:9037] zzz999 4682 NUBP1 nucleotide binding protein 1 (MinD homolog, E. coli) [Source:HGNC Symbol;Acc:8041] zzz999 7163 TPD52 tumor protein D52 [Source:HGNC Symbol;Acc:12005] T 84549 MAK16 MAK16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13703] zzz999 253635 CCDC75 coiled-coil domain containing 75 [Source:HGNC Symbol;Acc:26768] zzz999 2779 GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:HGNC Symbol;Acc:4393] zzz999 2631 GBAS glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179] zzz999 23237 ARC activity-regulated cytoskeleton-associated protein [Source:HGNC Symbol;Acc:648] T 23275 POFUT2 protein O-fucosyltransferase 2 [Source:HGNC Symbol;Acc:14683] T 1548 CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6 [Source:HGNC Symbol;Acc:2610] zzz999 6497 SKI v-ski sarcoma viral oncogene homolog (avian) [Source:HGNC Symbol;Acc:10896] zzz999 124801 LSM12 LSM12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26407] P T 8725 C19orf2 chromosome 19 open reading frame 2 [Source:HGNC Symbol;Acc:13236] zzz999 6588 SLN sarcolipin [Source:HGNC Symbol;Acc:11089] zzz999 387263 C6orf120 chromosome 6 open reading frame 120 [Source:HGNC Symbol;Acc:21247] zzz999 57050 UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24477] zzz999 58497 PRUNE prune homolog (Drosophila) [Source:HGNC Symbol;Acc:13420] T 5077 PAX3 paired box 3 [Source:HGNC Symbol;Acc:8617] zzz999 89870 TRIM15 tripartite motif containing 15 [Source:HGNC Symbol;Acc:16284] zzz999 8828 NRP2 neuropilin 2 [Source:HGNC Symbol;Acc:8005] zzz999 11193 WBP4 WW domain binding protein 4 (formin binding protein 21) [Source:HGNC Symbol;Acc:12739] zzz999 364 AQP7 aquaporin 7 [Source:HGNC Symbol;Acc:640] zzz999 10331 B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:HGNC Symbol;Acc:13528] zzz999 89845 ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:HGNC Symbol;Acc:52] zzz999 7709 ZBTB17 zinc finger and BTB domain containing 17 [Source:HGNC Symbol;Acc:12936] zzz999 9146 HGS hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:4897] T 23023 TMCC1 transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:29116] P T 9097 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) [Source:HGNC Symbol;Acc:12612] T 84220 RGPD6 RANBP2-like and GRIP domain containing 6 [Source:HGNC Symbol;Acc:32419] zzz999 669 BPGM 2,3-bisphosphoglycerate mutase [Source:HGNC Symbol;Acc:1093] zzz999 3275 PRMT2 protein arginine methyltransferase 2 [Source:HGNC Symbol;Acc:5186] zzz999 7480 WNT10B wingless-type MMTV integration site family, member 10B [Source:HGNC Symbol;Acc:12775] zzz999 10791 VAMP5 vesicle-associated membrane protein 5 (myobrevin) [Source:HGNC Symbol;Acc:12646] zzz999 80317 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 [Source:HGNC Symbol;Acc:13853] zzz999 11248 NXPH3 neurexophilin 3 [Source:HGNC Symbol;Acc:8077] T 9949 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:467] P T 23387 SIK3 SIK family kinase 3 [Source:HGNC Symbol;Acc:29165] T 26953 RANBP6 RAN binding protein 6 [Source:HGNC Symbol;Acc:9851] zzz999 9043 SPAG9 sperm associated antigen 9 [Source:HGNC Symbol;Acc:14524] zzz999 2994 GYPB glycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:4703] T 10618 TGOLN2 trans-golgi network protein 2 [Source:HGNC Symbol;Acc:15450] T 23547 LILRA4 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4 [Source:HGNC Symbol;Acc:15503] zzz999 10814 CPLX2 complexin 2 [Source:HGNC Symbol;Acc:2310] P T 2830 GPR6 G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:4515] zzz999 55888 ZNF167 zinc finger protein 167 [Source:HGNC Symbol;Acc:12955] T 5903 RANBP2 RAN binding protein 2 [Source:HGNC Symbol;Acc:9848] zzz999

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